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The hypocotyl is the part of a plant embryo or seedling located below the cotyledons (seed leaves). During germination, the hypocotyl is the embryonic stem that elongates, often raising the cotyledons above the ground in a process called epigeal germination. In some cases, the cotyledons may develop chlorophyll and become photosynthetic, while in others, they shrink and die after transferring stored nutrients to the developing seedling. The hypocotyl's growth helps the young shoot emerge from the seed and orient itself towards light.1234

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