Why does the position of two species next to each other on a phylogenetic tree not always show close relatedness?
The position of two species next to each other on a phylogenetic tree does not always indicate close relatedness because these diagrams depict lines of descent rather than physical similarity or proximity.1
In phylogenetics, relatedness is defined strictly by the recency of a common ancestor, represented by a node where branches intersect. Because the branches of a tree can be rotated at any node without altering the underlying evolutionary information, two species may appear adjacent simply due to the specific layout chosen by the illustrator.12
To accurately determine how closely related two organisms are, you must trace their respective branches back to the most recent common ancestor they share. Proximity at the tips of the tree is often a visual artifact of the diagram's orientation and does not necessarily reflect the true evolutionary distance between the organisms.12